Please note: The FAQ pages at the HPCVL website are continuously being revised. Some pages might pertain to an older configuration of the system. Please let us know if you encounter problems or inaccuracies, and we will correct the entries.
The binary executable is in /opt/namd on the HPCVL Clusters. The present version of the program is 2.7, and it is available in the default 32-bit version. Therefore, all the relevant executables are in /opt/namd/2.7/32bit. Documentation can be found in/opt/namd/2.7/doc and example input files are in /opt/namd/2.7/example.